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Cluster: HRGMv2_2531_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2531_10 HRGMv2_2531_10_4 3735 4139 - 4.A.6.1.18
TC HRGMv2_2531_10 HRGMv2_2531_10_5 4143 4964 - 4.A.6.1.18
TC HRGMv2_2531_10 HRGMv2_2531_10_6 4951 5856 - 4.A.6.1.18
TC HRGMv2_2531_10 HRGMv2_2531_10_7 5883 6359 - 4.A.6.1.18
CAZyme HRGMv2_2531_10 HRGMv2_2531_10_8 6356 8143 - GH35
TF HRGMv2_2531_10 HRGMv2_2531_10_9 8463 9179 + GntR
CAZyme HRGMv2_2531_10 HRGMv2_2531_10_10 9494 13684 + GH20 | GH20
Gene ID: HRGMv2_2531_10_4
Type: TC
Location: 3735 - 4139 (-)
Gene ID: HRGMv2_2531_10_5
Type: TC
Location: 4143 - 4964 (-)
Gene ID: HRGMv2_2531_10_6
Type: TC
Location: 4951 - 5856 (-)
Gene ID: HRGMv2_2531_10_7
Type: TC
Location: 5883 - 6359 (-)
Gene ID: HRGMv2_2531_10_8
Type: CAZyme
Location: 6356 - 8143 (-)
Gene ID: HRGMv2_2531_10_9
Type: TF
Location: 8463 - 9179 (+)
Gene ID: HRGMv2_2531_10_10
Type: CAZyme
Location: 9494 - 13684 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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