dbCAN Logo

Cluster: HRGMv2_2531_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2531_8 HRGMv2_2531_8_36 34714 36972 - GT35
CAZyme HRGMv2_2531_8 HRGMv2_2531_8_37 36998 38515 - GH77
TC HRGMv2_2531_8 HRGMv2_2531_8_38 38995 40266 + 3.A.1.1.26
TC HRGMv2_2531_8 HRGMv2_2531_8_39 40377 41669 + 3.A.1.1.26
TC HRGMv2_2531_8 HRGMv2_2531_8_40 41671 42513 + 3.A.1.1.26
NULL(UNKNOWN) HRGMv2_2531_8 HRGMv2_2531_8_41 42659 43459 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2531_8 HRGMv2_2531_8_42 43469 44455 + LacI
TC HRGMv2_2531_8 HRGMv2_2531_8_43 44484 45425 - 2.A.115.1.1
Gene ID: HRGMv2_2531_8_36
Type: CAZyme
Location: 34714 - 36972 (-)
Gene ID: HRGMv2_2531_8_37
Type: CAZyme
Location: 36998 - 38515 (-)
Gene ID: HRGMv2_2531_8_38
Type: TC
Location: 38995 - 40266 (+)
Gene ID: HRGMv2_2531_8_39
Type: TC
Location: 40377 - 41669 (+)
Gene ID: HRGMv2_2531_8_40
Type: TC
Location: 41671 - 42513 (+)
Gene ID: HRGMv2_2531_8_41
Type:
Location: 42659 - 43459 (+)
Gene ID: HRGMv2_2531_8_42
Type: TF
Location: 43469 - 44455 (+)
Gene ID: HRGMv2_2531_8_43
Type: TC
Location: 44484 - 45425 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List