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Cluster: HRGMv2_2531_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2531_8 HRGMv2_2531_8_25 22503 22829 - 3.A.14.1.2
TC HRGMv2_2531_8 HRGMv2_2531_8_26 22831 23847 - 3.A.14.1.1
TC HRGMv2_2531_8 HRGMv2_2531_8_27 23795 24736 - 3.A.14.1.2
pfam HRGMv2_2531_8 HRGMv2_2531_8_28 24811 25182 - DUF1033
pfam HRGMv2_2531_8 HRGMv2_2531_8_29 25328 26386 - ADH_zinc_N | ADH_N
CAZyme HRGMv2_2531_8 HRGMv2_2531_8_30 26891 29341 - GT51
pfam HRGMv2_2531_8 HRGMv2_2531_8_31 29482 30738 + tRNA-synt_1b | S4 | SYY_C-terminal
TC HRGMv2_2531_8 HRGMv2_2531_8_32 30816 32879 - 3.A.3.32.6
Gene ID: HRGMv2_2531_8_25
Type: TC
Location: 22503 - 22829 (-)
Gene ID: HRGMv2_2531_8_26
Type: TC
Location: 22831 - 23847 (-)
Gene ID: HRGMv2_2531_8_27
Type: TC
Location: 23795 - 24736 (-)
Gene ID: HRGMv2_2531_8_28
Type: pfam
Location: 24811 - 25182 (-)
Gene ID: HRGMv2_2531_8_29
Type: pfam
Location: 25328 - 26386 (-)
Gene ID: HRGMv2_2531_8_30
Type: CAZyme
Location: 26891 - 29341 (-)
Gene ID: HRGMv2_2531_8_31
Type: pfam
Location: 29482 - 30738 (+)
Gene ID: HRGMv2_2531_8_32
Type: TC
Location: 30816 - 32879 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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