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Cluster: HRGMv2_2531_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2531_7 HRGMv2_2531_7_73 71689 73323 - 3.A.1.147.8
TC HRGMv2_2531_7 HRGMv2_2531_7_74 73304 74053 - 3.A.1.147.8
CAZyme HRGMv2_2531_7 HRGMv2_2531_7_75 74231 75685 + GH13_5
pfam HRGMv2_2531_7 HRGMv2_2531_7_76 75775 78393 - tRNA-synt_2c | DHHA1 | tRNA_SAD
pfam HRGMv2_2531_7 HRGMv2_2531_7_77 78414 78899 - LOR
TC HRGMv2_2531_7 HRGMv2_2531_7_78 79567 80637 - 3.A.1.11.7
TC HRGMv2_2531_7 HRGMv2_2531_7_79 80634 81407 - 3.A.1.11.7
TC HRGMv2_2531_7 HRGMv2_2531_7_80 81404 82210 - 3.A.1.11.7
TC HRGMv2_2531_7 HRGMv2_2531_7_81 82191 83348 - 3.A.1.11.7
Gene ID: HRGMv2_2531_7_73
Type: TC
Location: 71689 - 73323 (-)
Gene ID: HRGMv2_2531_7_74
Type: TC
Location: 73304 - 74053 (-)
Gene ID: HRGMv2_2531_7_75
Type: CAZyme
Location: 74231 - 75685 (+)
Gene ID: HRGMv2_2531_7_76
Type: pfam
Location: 75775 - 78393 (-)
Gene ID: HRGMv2_2531_7_77
Type: pfam
Location: 78414 - 78899 (-)
Gene ID: HRGMv2_2531_7_78
Type: TC
Location: 79567 - 80637 (-)
Gene ID: HRGMv2_2531_7_79
Type: TC
Location: 80634 - 81407 (-)
Gene ID: HRGMv2_2531_7_80
Type: TC
Location: 81404 - 82210 (-)
Gene ID: HRGMv2_2531_7_81
Type: TC
Location: 82191 - 83348 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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