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Cluster: HRGMv2_2531_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2531_4 HRGMv2_2531_4_91 83352 84332 + CE7
CAZyme HRGMv2_2531_4 HRGMv2_2531_4_92 84661 88236 + CBM40 | GH33
pfam HRGMv2_2531_4 HRGMv2_2531_4_93 88491 89189 + NanE
STP HRGMv2_2531_4 HRGMv2_2531_4_94 89304 90632 + SBP_bac_1
TC HRGMv2_2531_4 HRGMv2_2531_4_95 90833 91720 + 3.A.1.1.20
TC HRGMv2_2531_4 HRGMv2_2531_4_96 91736 92575 + 3.A.1.1.34
pfam HRGMv2_2531_4 HRGMv2_2531_4_97 92746 93198 + DUF386
TC HRGMv2_2531_4 HRGMv2_2531_4_98 93209 93853 + 9.B.28.1.4
Gene ID: HRGMv2_2531_4_91
Type: CAZyme
Location: 83352 - 84332 (+)
Gene ID: HRGMv2_2531_4_92
Type: CAZyme
Location: 84661 - 88236 (+)
Gene ID: HRGMv2_2531_4_93
Type: pfam
Location: 88491 - 89189 (+)
Gene ID: HRGMv2_2531_4_94
Type: STP
Location: 89304 - 90632 (+)
Gene ID: HRGMv2_2531_4_95
Type: TC
Location: 90833 - 91720 (+)
Gene ID: HRGMv2_2531_4_96
Type: TC
Location: 91736 - 92575 (+)
Gene ID: HRGMv2_2531_4_97
Type: pfam
Location: 92746 - 93198 (+)
Gene ID: HRGMv2_2531_4_98
Type: TC
Location: 93209 - 93853 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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