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Cluster: HRGMv2_2529_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2529_5 HRGMv2_2529_5_46 50300 51718 + 2.A.3.2.11
TC HRGMv2_2529_5 HRGMv2_2529_5_47 51839 53266 + 2.A.3.2.11
CAZyme HRGMv2_2529_5 HRGMv2_2529_5_48 53363 54808 - GH13_18
TF HRGMv2_2529_5 HRGMv2_2529_5_49 54949 55899 + LacI
TC HRGMv2_2529_5 HRGMv2_2529_5_50 56213 56407 + 3.A.1.1.28
pfam HRGMv2_2529_5 HRGMv2_2529_5_51 57632 58249 - DUF4097
pfam HRGMv2_2529_5 HRGMv2_2529_5_52 58565 59083 + Macro
TC HRGMv2_2529_5 HRGMv2_2529_5_53 59304 60797 + 2.A.17.1.6
Gene ID: HRGMv2_2529_5_46
Type: TC
Location: 50300 - 51718 (+)
Gene ID: HRGMv2_2529_5_47
Type: TC
Location: 51839 - 53266 (+)
Gene ID: HRGMv2_2529_5_48
Type: CAZyme
Location: 53363 - 54808 (-)
Gene ID: HRGMv2_2529_5_49
Type: TF
Location: 54949 - 55899 (+)
Gene ID: HRGMv2_2529_5_50
Type: TC
Location: 56213 - 56407 (+)
Gene ID: HRGMv2_2529_5_51
Type: pfam
Location: 57632 - 58249 (-)
Gene ID: HRGMv2_2529_5_52
Type: pfam
Location: 58565 - 59083 (+)
Gene ID: HRGMv2_2529_5_53
Type: TC
Location: 59304 - 60797 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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