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Cluster: HRGMv2_2529_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2529_2 HRGMv2_2529_2_67 75873 77450 + GH78
TC HRGMv2_2529_2 HRGMv2_2529_2_68 77474 78706 + 2.A.1.68.1
CAZyme HRGMv2_2529_2 HRGMv2_2529_2_69 78847 80331 + GH1
sulfatase HRGMv2_2529_2 HRGMv2_2529_2_70 80385 81296 + S1_7
NULL(UNKNOWN) HRGMv2_2529_2 HRGMv2_2529_2_71 81537 83075 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2529_2 HRGMv2_2529_2_72 83262 83948 + 9.B.120.1.4
TC HRGMv2_2529_2 HRGMv2_2529_2_73 84050 85456 + 2.A.3.1.15
TC HRGMv2_2529_2 HRGMv2_2529_2_74 85443 86825 + 2.A.3.1.15
TC HRGMv2_2529_2 HRGMv2_2529_2_75 86881 87753 - 8.A.21.1.3
Gene ID: HRGMv2_2529_2_67
Type: CAZyme
Location: 75873 - 77450 (+)
Gene ID: HRGMv2_2529_2_68
Type: TC
Location: 77474 - 78706 (+)
Gene ID: HRGMv2_2529_2_69
Type: CAZyme
Location: 78847 - 80331 (+)
Gene ID: HRGMv2_2529_2_70
Type: sulfatase
Location: 80385 - 81296 (+)
Gene ID: HRGMv2_2529_2_71
Type:
Location: 81537 - 83075 (-)
Gene ID: HRGMv2_2529_2_72
Type: TC
Location: 83262 - 83948 (+)
Gene ID: HRGMv2_2529_2_73
Type: TC
Location: 84050 - 85456 (+)
Gene ID: HRGMv2_2529_2_74
Type: TC
Location: 85443 - 86825 (+)
Gene ID: HRGMv2_2529_2_75
Type: TC
Location: 86881 - 87753 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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