Cluster: HRGMv2_2529_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2529
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2529_20 | HRGMv2_2529_20_1 | 3 | 737 | - | 1.C.105.2.7 |
| CAZyme | HRGMv2_2529_20 | HRGMv2_2529_20_2 | 766 | 2919 | - | GH73 |
| NULL(UNKNOWN) | HRGMv2_2529_20 | HRGMv2_2529_20_3 | 3167 | 4054 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2529_20 | HRGMv2_2529_20_4 | 4144 | 4548 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2529_20 | HRGMv2_2529_20_5 | 4652 | 6694 | + | 2.A.72.1.3 |
| peptidase | HRGMv2_2529_20 | HRGMv2_2529_20_6 | 6738 | 8681 | - | M13.010 |
| TC | HRGMv2_2529_20 | HRGMv2_2529_20_7 | 8784 | 9998 | - | 2.A.1.2.69 |
Gene ID: HRGMv2_2529_20_1
Type: TC
Location: 3 - 737 (-)
Type: TC
Location: 3 - 737 (-)
Gene ID: HRGMv2_2529_20_2
Type: CAZyme
Location: 766 - 2919 (-)
Type: CAZyme
Location: 766 - 2919 (-)
Gene ID: HRGMv2_2529_20_3
Type:
Location: 3167 - 4054 (+)
Type:
Location: 3167 - 4054 (+)
Gene ID: HRGMv2_2529_20_4
Type:
Location: 4144 - 4548 (+)
Type:
Location: 4144 - 4548 (+)
Gene ID: HRGMv2_2529_20_5
Type: TC
Location: 4652 - 6694 (+)
Type: TC
Location: 4652 - 6694 (+)
Gene ID: HRGMv2_2529_20_6
Type: peptidase
Location: 6738 - 8681 (-)
Type: peptidase
Location: 6738 - 8681 (-)
Gene ID: HRGMv2_2529_20_7
Type: TC
Location: 8784 - 9998 (-)
Type: TC
Location: 8784 - 9998 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus jensenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.