Cluster: HRGMv2_2529_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2529
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2529_12 | HRGMv2_2529_12_15 | 17017 | 19656 | + | 3.A.3.2.28 |
| NULL(UNKNOWN) | HRGMv2_2529_12 | HRGMv2_2529_12_16 | 19762 | 21243 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2529_12 | HRGMv2_2529_12_17 | 21291 | 21734 | + | SprT-like |
| TC | HRGMv2_2529_12 | HRGMv2_2529_12_18 | 21986 | 22567 | + | 2.A.87.2.3 |
| CAZyme | HRGMv2_2529_12 | HRGMv2_2529_12_19 | 22582 | 23226 | + | GH73 |
Gene ID: HRGMv2_2529_12_15
Type: TC
Location: 17017 - 19656 (+)
Type: TC
Location: 17017 - 19656 (+)
Gene ID: HRGMv2_2529_12_16
Type:
Location: 19762 - 21243 (+)
Type:
Location: 19762 - 21243 (+)
Gene ID: HRGMv2_2529_12_17
Type: pfam
Location: 21291 - 21734 (+)
Type: pfam
Location: 21291 - 21734 (+)
Gene ID: HRGMv2_2529_12_18
Type: TC
Location: 21986 - 22567 (+)
Type: TC
Location: 21986 - 22567 (+)
Gene ID: HRGMv2_2529_12_19
Type: CAZyme
Location: 22582 - 23226 (+)
Type: CAZyme
Location: 22582 - 23226 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus jensenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.