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Cluster: HRGMv2_2522_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2522_12 HRGMv2_2522_12_46 34458 35435 - CE7
pfam HRGMv2_2522_12 HRGMv2_2522_12_47 35443 36324 - ROK
pfam HRGMv2_2522_12 HRGMv2_2522_12_48 36341 37258 - DHDPS
TC HRGMv2_2522_12 HRGMv2_2522_12_49 37255 37917 - 9.B.28.1.4
pfam HRGMv2_2522_12 HRGMv2_2522_12_50 37937 38380 - DUF386
TC HRGMv2_2522_12 HRGMv2_2522_12_51 38393 39223 - 3.A.1.1.34
TC HRGMv2_2522_12 HRGMv2_2522_12_52 39233 40120 - 3.A.1.1.20
STP HRGMv2_2522_12 HRGMv2_2522_12_53 40208 41524 - SBP_bac_1
pfam HRGMv2_2522_12 HRGMv2_2522_12_54 41571 42269 - NanE
CAZyme HRGMv2_2522_12 HRGMv2_2522_12_55 42516 43820 - CBM50
Gene ID: HRGMv2_2522_12_46
Type: CAZyme
Location: 34458 - 35435 (-)
Gene ID: HRGMv2_2522_12_47
Type: pfam
Location: 35443 - 36324 (-)
Gene ID: HRGMv2_2522_12_48
Type: pfam
Location: 36341 - 37258 (-)
Gene ID: HRGMv2_2522_12_49
Type: TC
Location: 37255 - 37917 (-)
Gene ID: HRGMv2_2522_12_50
Type: pfam
Location: 37937 - 38380 (-)
Gene ID: HRGMv2_2522_12_51
Type: TC
Location: 38393 - 39223 (-)
Gene ID: HRGMv2_2522_12_52
Type: TC
Location: 39233 - 40120 (-)
Gene ID: HRGMv2_2522_12_53
Type: STP
Location: 40208 - 41524 (-)
Gene ID: HRGMv2_2522_12_54
Type: pfam
Location: 41571 - 42269 (-)
Gene ID: HRGMv2_2522_12_55
Type: CAZyme
Location: 42516 - 43820 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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