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Cluster: HRGMv2_2522_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2522_6 HRGMv2_2522_6_42 38118 39074 - GT100
CAZyme HRGMv2_2522_6 HRGMv2_2522_6_43 39158 40105 - GT2
CAZyme HRGMv2_2522_6 HRGMv2_2522_6_44 40139 41113 - GT2
pfam HRGMv2_2522_6 HRGMv2_2522_6_45 41113 42324 - Wzy_C
CAZyme HRGMv2_2522_6 HRGMv2_2522_6_46 42348 42830 - GT1
pfam HRGMv2_2522_6 HRGMv2_2522_6_47 42830 43279 - Alg14
TC HRGMv2_2522_6 HRGMv2_2522_6_48 43303 44691 - 9.B.18.1.2
TC HRGMv2_2522_6 HRGMv2_2522_6_49 44704 45402 - 8.A.3.2.3
TC HRGMv2_2522_6 HRGMv2_2522_6_50 45413 46105 - 8.A.3.2.3
Gene ID: HRGMv2_2522_6_42
Type: CAZyme
Location: 38118 - 39074 (-)
Gene ID: HRGMv2_2522_6_43
Type: CAZyme
Location: 39158 - 40105 (-)
Gene ID: HRGMv2_2522_6_44
Type: CAZyme
Location: 40139 - 41113 (-)
Gene ID: HRGMv2_2522_6_45
Type: pfam
Location: 41113 - 42324 (-)
Gene ID: HRGMv2_2522_6_46
Type: CAZyme
Location: 42348 - 42830 (-)
Gene ID: HRGMv2_2522_6_47
Type: pfam
Location: 42830 - 43279 (-)
Gene ID: HRGMv2_2522_6_48
Type: TC
Location: 43303 - 44691 (-)
Gene ID: HRGMv2_2522_6_49
Type: TC
Location: 44704 - 45402 (-)
Gene ID: HRGMv2_2522_6_50
Type: TC
Location: 45413 - 46105 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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