dbCAN Logo

Cluster: HRGMv2_2522_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2522_5 HRGMv2_2522_5_16 12369 13724 - 4.A.7.1.2
pfam HRGMv2_2522_5 HRGMv2_2522_5_17 13737 14021 - PTS_IIB
TC HRGMv2_2522_5 HRGMv2_2522_5_18 14024 16060 - 4.A.7.1.2
CAZyme HRGMv2_2522_5 HRGMv2_2522_5_19 16280 17905 - GH13_29
TC HRGMv2_2522_5 HRGMv2_2522_5_20 18127 20157 - 4.A.1.2.13
TC HRGMv2_2522_5 HRGMv2_2522_5_21 20439 21065 - 3.A.1.5.3
TC HRGMv2_2522_5 HRGMv2_2522_5_22 21049 21852 - 3.A.1.5.23
TC HRGMv2_2522_5 HRGMv2_2522_5_23 21864 22685 - 3.A.1.5.22
TC HRGMv2_2522_5 HRGMv2_2522_5_24 22682 23659 - 3.A.1.5.20
TC HRGMv2_2522_5 HRGMv2_2522_5_25 23772 25400 - 3.A.1.5.22
TC HRGMv2_2522_5 HRGMv2_2522_5_26 25643 26371 - 2.A.122.1.6
TC HRGMv2_2522_5 HRGMv2_2522_5_27 26373 26828 - 1.E.14.1.10
TF HRGMv2_2522_5 HRGMv2_2522_5_28 26998 27738 - LytTR
TC HRGMv2_2522_5 HRGMv2_2522_5_29 27719 29464 - 9.B.33.1.2
pfam HRGMv2_2522_5 HRGMv2_2522_5_30 29491 30135 - Hydrolase | HAD | HAD_2
TC HRGMv2_2522_5 HRGMv2_2522_5_31 30258 30653 - 3.A.7.19.1
Gene ID: HRGMv2_2522_5_16
Type: TC
Location: 12369 - 13724 (-)
Gene ID: HRGMv2_2522_5_17
Type: pfam
Location: 13737 - 14021 (-)
Gene ID: HRGMv2_2522_5_18
Type: TC
Location: 14024 - 16060 (-)
Gene ID: HRGMv2_2522_5_19
Type: CAZyme
Location: 16280 - 17905 (-)
Gene ID: HRGMv2_2522_5_20
Type: TC
Location: 18127 - 20157 (-)
Gene ID: HRGMv2_2522_5_21
Type: TC
Location: 20439 - 21065 (-)
Gene ID: HRGMv2_2522_5_22
Type: TC
Location: 21049 - 21852 (-)
Gene ID: HRGMv2_2522_5_23
Type: TC
Location: 21864 - 22685 (-)
Gene ID: HRGMv2_2522_5_24
Type: TC
Location: 22682 - 23659 (-)
Gene ID: HRGMv2_2522_5_25
Type: TC
Location: 23772 - 25400 (-)
Gene ID: HRGMv2_2522_5_26
Type: TC
Location: 25643 - 26371 (-)
Gene ID: HRGMv2_2522_5_27
Type: TC
Location: 26373 - 26828 (-)
Gene ID: HRGMv2_2522_5_28
Type: TF
Location: 26998 - 27738 (-)
Gene ID: HRGMv2_2522_5_29
Type: TC
Location: 27719 - 29464 (-)
Gene ID: HRGMv2_2522_5_30
Type: pfam
Location: 29491 - 30135 (-)
Gene ID: HRGMv2_2522_5_31
Type: TC
Location: 30258 - 30653 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List