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Cluster: HRGMv2_2522_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2522_4 HRGMv2_2522_4_92 91370 92743 - 2.A.1.4.3
CAZyme HRGMv2_2522_4 HRGMv2_2522_4_93 93159 95423 - GT35
CAZyme HRGMv2_2522_4 HRGMv2_2522_4_94 95435 96931 - GH77
TF HRGMv2_2522_4 HRGMv2_2522_4_95 97052 98080 - LacI
TC HRGMv2_2522_4 HRGMv2_2522_4_96 98336 99583 + 3.A.1.1.27
TC HRGMv2_2522_4 HRGMv2_2522_4_97 99681 101051 + 3.A.1.1.27
TC HRGMv2_2522_4 HRGMv2_2522_4_98 101051 101887 + 3.A.1.1.27
TC HRGMv2_2522_4 HRGMv2_2522_4_99 102118 103590 + 2.A.17.1.6
Gene ID: HRGMv2_2522_4_92
Type: TC
Location: 91370 - 92743 (-)
Gene ID: HRGMv2_2522_4_93
Type: CAZyme
Location: 93159 - 95423 (-)
Gene ID: HRGMv2_2522_4_94
Type: CAZyme
Location: 95435 - 96931 (-)
Gene ID: HRGMv2_2522_4_95
Type: TF
Location: 97052 - 98080 (-)
Gene ID: HRGMv2_2522_4_96
Type: TC
Location: 98336 - 99583 (+)
Gene ID: HRGMv2_2522_4_97
Type: TC
Location: 99681 - 101051 (+)
Gene ID: HRGMv2_2522_4_98
Type: TC
Location: 101051 - 101887 (+)
Gene ID: HRGMv2_2522_4_99
Type: TC
Location: 102118 - 103590 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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