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Cluster: HRGMv2_2501_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2501_27 HRGMv2_2501_27_7 4385 5905 - GT4
TC HRGMv2_2501_27 HRGMv2_2501_27_8 5918 8290 - 3.A.5.10.1
TC HRGMv2_2501_27 HRGMv2_2501_27_9 8283 8723 - 3.A.5.10.1
TC HRGMv2_2501_27 HRGMv2_2501_27_10 8720 10249 - 3.A.5.10.1
TC HRGMv2_2501_27 HRGMv2_2501_27_11 10233 11813 - 3.A.5.10.1
TC HRGMv2_2501_27 HRGMv2_2501_27_12 11823 13040 - 3.A.5.10.1
CAZyme HRGMv2_2501_27 HRGMv2_2501_27_13 13113 14354 - GT8
CAZyme HRGMv2_2501_27 HRGMv2_2501_27_14 14370 15596 - GT8
Gene ID: HRGMv2_2501_27_7
Type: CAZyme
Location: 4385 - 5905 (-)
Gene ID: HRGMv2_2501_27_8
Type: TC
Location: 5918 - 8290 (-)
Gene ID: HRGMv2_2501_27_9
Type: TC
Location: 8283 - 8723 (-)
Gene ID: HRGMv2_2501_27_10
Type: TC
Location: 8720 - 10249 (-)
Gene ID: HRGMv2_2501_27_11
Type: TC
Location: 10233 - 11813 (-)
Gene ID: HRGMv2_2501_27_12
Type: TC
Location: 11823 - 13040 (-)
Gene ID: HRGMv2_2501_27_13
Type: CAZyme
Location: 13113 - 14354 (-)
Gene ID: HRGMv2_2501_27_14
Type: CAZyme
Location: 14370 - 15596 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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