Cluster: HRGMv2_2501_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2501
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2501_24 | HRGMv2_2501_24_2 | 780 | 2054 | + | 2.A.6.6.11 |
| TF | HRGMv2_2501_24 | HRGMv2_2501_24_3 | 2196 | 3161 | - | LacI |
| CAZyme | HRGMv2_2501_24 | HRGMv2_2501_24_4 | 3142 | 4596 | - | GH32 |
| TC | HRGMv2_2501_24 | HRGMv2_2501_24_5 | 4971 | 6920 | + | 4.A.1.2.12 |
Gene ID: HRGMv2_2501_24_2
Type: TC
Location: 780 - 2054 (+)
Type: TC
Location: 780 - 2054 (+)
Gene ID: HRGMv2_2501_24_3
Type: TF
Location: 2196 - 3161 (-)
Type: TF
Location: 2196 - 3161 (-)
Gene ID: HRGMv2_2501_24_4
Type: CAZyme
Location: 3142 - 4596 (-)
Type: CAZyme
Location: 3142 - 4596 (-)
Gene ID: HRGMv2_2501_24_5
Type: TC
Location: 4971 - 6920 (+)
Type: TC
Location: 4971 - 6920 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.