Cluster: HRGMv2_2501_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2501
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2501_17 | HRGMv2_2501_17_12 | 14183 | 16084 | - | PL12_1 |
| pfam | HRGMv2_2501_17 | HRGMv2_2501_17_13 | 16106 | 16399 | - | YajC |
| TC | HRGMv2_2501_17 | HRGMv2_2501_17_14 | 16399 | 17217 | - | 4.A.6.1.14 |
| TC | HRGMv2_2501_17 | HRGMv2_2501_17_15 | 17204 | 17983 | - | 4.A.6.1.14 |
| TC | HRGMv2_2501_17 | HRGMv2_2501_17_16 | 17998 | 18489 | - | 4.A.6.1.14 |
| CAZyme | HRGMv2_2501_17 | HRGMv2_2501_17_17 | 18500 | 19690 | - | GH88 |
| TC | HRGMv2_2501_17 | HRGMv2_2501_17_18 | 19702 | 20136 | - | 4.A.6.1.14 |
Gene ID: HRGMv2_2501_17_12
Type: CAZyme
Location: 14183 - 16084 (-)
Type: CAZyme
Location: 14183 - 16084 (-)
Gene ID: HRGMv2_2501_17_13
Type: pfam
Location: 16106 - 16399 (-)
Type: pfam
Location: 16106 - 16399 (-)
Gene ID: HRGMv2_2501_17_14
Type: TC
Location: 16399 - 17217 (-)
Type: TC
Location: 16399 - 17217 (-)
Gene ID: HRGMv2_2501_17_15
Type: TC
Location: 17204 - 17983 (-)
Type: TC
Location: 17204 - 17983 (-)
Gene ID: HRGMv2_2501_17_16
Type: TC
Location: 17998 - 18489 (-)
Type: TC
Location: 17998 - 18489 (-)
Gene ID: HRGMv2_2501_17_17
Type: CAZyme
Location: 18500 - 19690 (-)
Type: CAZyme
Location: 18500 - 19690 (-)
Gene ID: HRGMv2_2501_17_18
Type: TC
Location: 19702 - 20136 (-)
Type: TC
Location: 19702 - 20136 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.