Cluster: HRGMv2_2501_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2501
- CGC Family ID: CGCFAM_00160
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2501_17 | HRGMv2_2501_17_1 | 3 | 329 | - | 4.A.1.2.13 |
| TF | HRGMv2_2501_17 | HRGMv2_2501_17_2 | 514 | 1227 | + | GntR |
| CAZyme | HRGMv2_2501_17 | HRGMv2_2501_17_3 | 1481 | 6604 | + | GH95 |
| TC | HRGMv2_2501_17 | HRGMv2_2501_17_4 | 6674 | 7654 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_2501_17_1
Type: TC
Location: 3 - 329 (-)
Type: TC
Location: 3 - 329 (-)
Gene ID: HRGMv2_2501_17_2
Type: TF
Location: 514 - 1227 (+)
Type: TF
Location: 514 - 1227 (+)
Gene ID: HRGMv2_2501_17_3
Type: CAZyme
Location: 1481 - 6604 (+)
Type: CAZyme
Location: 1481 - 6604 (+)
Gene ID: HRGMv2_2501_17_4
Type: TC
Location: 6674 - 7654 (-)
Type: TC
Location: 6674 - 7654 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.