Cluster: HRGMv2_2501_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2501
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2501_98 | HRGMv2_2501_98_5 | 1429 | 1752 | - | 3.A.14.1.2 |
| TC | HRGMv2_2501_98 | HRGMv2_2501_98_6 | 1754 | 2770 | - | 3.A.14.1.1 |
| TC | HRGMv2_2501_98 | HRGMv2_2501_98_7 | 2718 | 3659 | - | 3.A.14.1.2 |
| pfam | HRGMv2_2501_98 | HRGMv2_2501_98_8 | 3721 | 4086 | - | DUF1033 |
| CAZyme | HRGMv2_2501_98 | HRGMv2_2501_98_9 | 4243 | 5394 | - | CE9 |
Gene ID: HRGMv2_2501_98_5
Type: TC
Location: 1429 - 1752 (-)
Type: TC
Location: 1429 - 1752 (-)
Gene ID: HRGMv2_2501_98_6
Type: TC
Location: 1754 - 2770 (-)
Type: TC
Location: 1754 - 2770 (-)
Gene ID: HRGMv2_2501_98_7
Type: TC
Location: 2718 - 3659 (-)
Type: TC
Location: 2718 - 3659 (-)
Gene ID: HRGMv2_2501_98_8
Type: pfam
Location: 3721 - 4086 (-)
Type: pfam
Location: 3721 - 4086 (-)
Gene ID: HRGMv2_2501_98_9
Type: CAZyme
Location: 4243 - 5394 (-)
Type: CAZyme
Location: 4243 - 5394 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.