Cluster: HRGMv2_2501_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2501
- CGC Family ID: CGCFAM_01081
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2501_82 | HRGMv2_2501_82_2 | 843 | 2363 | - | 3.A.1.12.8 |
| TC | HRGMv2_2501_82 | HRGMv2_2501_82_3 | 2356 | 3084 | - | 3.A.1.12.8 |
| pfam | HRGMv2_2501_82 | HRGMv2_2501_82_4 | 3099 | 3863 | - | SnoaL | SnoaL_2 |
| TF | HRGMv2_2501_82 | HRGMv2_2501_82_5 | 3867 | 4304 | - | MarR |
| TC | HRGMv2_2501_82 | HRGMv2_2501_82_6 | 4449 | 5720 | - | 9.B.67.1.2 |
| CAZyme | HRGMv2_2501_82 | HRGMv2_2501_82_7 | 5775 | 7217 | - | GH13_18 |
Gene ID: HRGMv2_2501_82_2
Type: TC
Location: 843 - 2363 (-)
Type: TC
Location: 843 - 2363 (-)
Gene ID: HRGMv2_2501_82_3
Type: TC
Location: 2356 - 3084 (-)
Type: TC
Location: 2356 - 3084 (-)
Gene ID: HRGMv2_2501_82_4
Type: pfam
Location: 3099 - 3863 (-)
Type: pfam
Location: 3099 - 3863 (-)
Gene ID: HRGMv2_2501_82_5
Type: TF
Location: 3867 - 4304 (-)
Type: TF
Location: 3867 - 4304 (-)
Gene ID: HRGMv2_2501_82_6
Type: TC
Location: 4449 - 5720 (-)
Type: TC
Location: 4449 - 5720 (-)
Gene ID: HRGMv2_2501_82_7
Type: CAZyme
Location: 5775 - 7217 (-)
Type: CAZyme
Location: 5775 - 7217 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.