Cluster: HRGMv2_2501_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2501
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2501_79 | HRGMv2_2501_79_1 | 1 | 828 | - | 3.A.1.1.28 |
| TC | HRGMv2_2501_79 | HRGMv2_2501_79_2 | 845 | 1717 | - | 3.A.1.1.28 |
| TC | HRGMv2_2501_79 | HRGMv2_2501_79_3 | 1736 | 2986 | - | 3.A.1.1.28 |
| CAZyme | HRGMv2_2501_79 | HRGMv2_2501_79_4 | 3021 | 5183 | - | GH36 |
Gene ID: HRGMv2_2501_79_1
Type: TC
Location: 1 - 828 (-)
Type: TC
Location: 1 - 828 (-)
Gene ID: HRGMv2_2501_79_2
Type: TC
Location: 845 - 1717 (-)
Type: TC
Location: 845 - 1717 (-)
Gene ID: HRGMv2_2501_79_3
Type: TC
Location: 1736 - 2986 (-)
Type: TC
Location: 1736 - 2986 (-)
Gene ID: HRGMv2_2501_79_4
Type: CAZyme
Location: 3021 - 5183 (-)
Type: CAZyme
Location: 3021 - 5183 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.