Cluster: HRGMv2_2501_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2501
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2501_62 | HRGMv2_2501_62_2 | 367 | 1059 | + | 3.A.1.3.13 |
| TC | HRGMv2_2501_62 | HRGMv2_2501_62_3 | 1063 | 1785 | + | 3.A.1.3.13 |
| TC | HRGMv2_2501_62 | HRGMv2_2501_62_4 | 1795 | 2559 | + | 3.A.1.3.14 |
| CAZyme | HRGMv2_2501_62 | HRGMv2_2501_62_5 | 2762 | 6478 | - | CBM41 | CBM41 | GH13_12 |
Gene ID: HRGMv2_2501_62_2
Type: TC
Location: 367 - 1059 (+)
Type: TC
Location: 367 - 1059 (+)
Gene ID: HRGMv2_2501_62_3
Type: TC
Location: 1063 - 1785 (+)
Type: TC
Location: 1063 - 1785 (+)
Gene ID: HRGMv2_2501_62_4
Type: TC
Location: 1795 - 2559 (+)
Type: TC
Location: 1795 - 2559 (+)
Gene ID: HRGMv2_2501_62_5
Type: CAZyme
Location: 2762 - 6478 (-)
Type: CAZyme
Location: 2762 - 6478 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.