Cluster: HRGMv2_2501_CGC18
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2501
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2501_61 | HRGMv2_2501_61_1 | 1 | 885 | - | 3.A.1.14.15 |
| TC | HRGMv2_2501_61 | HRGMv2_2501_61_2 | 983 | 1735 | - | 3.A.1.14.3 |
| pfam | HRGMv2_2501_61 | HRGMv2_2501_61_3 | 1732 | 2688 | - | FecCD |
| TC | HRGMv2_2501_61 | HRGMv2_2501_61_4 | 2678 | 3637 | - | 3.A.1.14.13 |
| peptidase | HRGMv2_2501_61 | HRGMv2_2501_61_5 | 3871 | 4935 | + | M42.001 |
| NULL(UNKNOWN) | HRGMv2_2501_61 | HRGMv2_2501_61_6 | 4956 | 5252 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2501_61 | HRGMv2_2501_61_7 | 5350 | 6981 | - | 2.A.58.2.2 |
| CAZyme | HRGMv2_2501_61 | HRGMv2_2501_61_8 | 7314 | 9326 | + | GH85 |
Gene ID: HRGMv2_2501_61_1
Type: TC
Location: 1 - 885 (-)
Type: TC
Location: 1 - 885 (-)
Gene ID: HRGMv2_2501_61_2
Type: TC
Location: 983 - 1735 (-)
Type: TC
Location: 983 - 1735 (-)
Gene ID: HRGMv2_2501_61_3
Type: pfam
Location: 1732 - 2688 (-)
Type: pfam
Location: 1732 - 2688 (-)
Gene ID: HRGMv2_2501_61_4
Type: TC
Location: 2678 - 3637 (-)
Type: TC
Location: 2678 - 3637 (-)
Gene ID: HRGMv2_2501_61_5
Type: peptidase
Location: 3871 - 4935 (+)
Type: peptidase
Location: 3871 - 4935 (+)
Gene ID: HRGMv2_2501_61_6
Type:
Location: 4956 - 5252 (+)
Type:
Location: 4956 - 5252 (+)
Gene ID: HRGMv2_2501_61_7
Type: TC
Location: 5350 - 6981 (-)
Type: TC
Location: 5350 - 6981 (-)
Gene ID: HRGMv2_2501_61_8
Type: CAZyme
Location: 7314 - 9326 (+)
Type: CAZyme
Location: 7314 - 9326 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.