Cluster: HRGMv2_2501_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2501
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2501_56 | HRGMv2_2501_56_3 | 1487 | 2545 | - | GT28 |
| pfam | HRGMv2_2501_56 | HRGMv2_2501_56_4 | 2547 | 3899 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_2501_56 | HRGMv2_2501_56_5 | 4003 | 4644 | - | 3.A.1.134.10 |
Gene ID: HRGMv2_2501_56_3
Type: CAZyme
Location: 1487 - 2545 (-)
Type: CAZyme
Location: 1487 - 2545 (-)
Gene ID: HRGMv2_2501_56_4
Type: pfam
Location: 2547 - 3899 (-)
Type: pfam
Location: 2547 - 3899 (-)
Gene ID: HRGMv2_2501_56_5
Type: TC
Location: 4003 - 4644 (-)
Type: TC
Location: 4003 - 4644 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.