Cluster: HRGMv2_2501_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2501
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2501_55 | HRGMv2_2501_55_3 | 1787 | 2656 | - | 1.A.8.2.2 |
| pfam | HRGMv2_2501_55 | HRGMv2_2501_55_4 | 2813 | 3979 | - | CPSase_L_D2 | ATP-grasp_4 |
| peptidase | HRGMv2_2501_55 | HRGMv2_2501_55_5 | 3992 | 4732 | - | S09.UPW |
| CAZyme | HRGMv2_2501_55 | HRGMv2_2501_55_6 | 4753 | 5577 | - | CE1 |
Gene ID: HRGMv2_2501_55_3
Type: TC
Location: 1787 - 2656 (-)
Type: TC
Location: 1787 - 2656 (-)
Gene ID: HRGMv2_2501_55_4
Type: pfam
Location: 2813 - 3979 (-)
Type: pfam
Location: 2813 - 3979 (-)
Gene ID: HRGMv2_2501_55_5
Type: peptidase
Location: 3992 - 4732 (-)
Type: peptidase
Location: 3992 - 4732 (-)
Gene ID: HRGMv2_2501_55_6
Type: CAZyme
Location: 4753 - 5577 (-)
Type: CAZyme
Location: 4753 - 5577 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.