Cluster: HRGMv2_2501_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2501
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2501_36 | HRGMv2_2501_36_3 | 1266 | 1583 | + | 4.A.3.1.1 |
| TC | HRGMv2_2501_36 | HRGMv2_2501_36_4 | 1583 | 3277 | + | 4.A.3.1.1 |
| CAZyme | HRGMv2_2501_36 | HRGMv2_2501_36_5 | 3362 | 4768 | + | GH1 |
Gene ID: HRGMv2_2501_36_3
Type: TC
Location: 1266 - 1583 (+)
Type: TC
Location: 1266 - 1583 (+)
Gene ID: HRGMv2_2501_36_4
Type: TC
Location: 1583 - 3277 (+)
Type: TC
Location: 1583 - 3277 (+)
Gene ID: HRGMv2_2501_36_5
Type: CAZyme
Location: 3362 - 4768 (+)
Type: CAZyme
Location: 3362 - 4768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BW
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.