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Cluster: HRGMv2_2484_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2484_5 HRGMv2_2484_5_110 93993 94688 - 1.A.14.2.6
STP HRGMv2_2484_5 HRGMv2_2484_5_111 94720 95223 - HD
pfam HRGMv2_2484_5 HRGMv2_2484_5_112 95323 96066 - SpoU_methylase | SpoU_sub_bind | MRM3-like_sub_bind
TC HRGMv2_2484_5 HRGMv2_2484_5_113 96116 97390 - 2.A.1.5.3
CAZyme HRGMv2_2484_5 HRGMv2_2484_5_114 97408 98790 - GH32
TF HRGMv2_2484_5 HRGMv2_2484_5_115 99078 100067 - LacI
pfam HRGMv2_2484_5 HRGMv2_2484_5_116 100245 100523 + Acylphosphatase
TC HRGMv2_2484_5 HRGMv2_2484_5_117 100610 101527 + 2.A.9.3.6
Gene ID: HRGMv2_2484_5_110
Type: TC
Location: 93993 - 94688 (-)
Gene ID: HRGMv2_2484_5_111
Type: STP
Location: 94720 - 95223 (-)
Gene ID: HRGMv2_2484_5_112
Type: pfam
Location: 95323 - 96066 (-)
Gene ID: HRGMv2_2484_5_113
Type: TC
Location: 96116 - 97390 (-)
Gene ID: HRGMv2_2484_5_114
Type: CAZyme
Location: 97408 - 98790 (-)
Gene ID: HRGMv2_2484_5_115
Type: TF
Location: 99078 - 100067 (-)
Gene ID: HRGMv2_2484_5_116
Type: pfam
Location: 100245 - 100523 (+)
Gene ID: HRGMv2_2484_5_117
Type: TC
Location: 100610 - 101527 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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