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Cluster: HRGMv2_2484_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2484_3 HRGMv2_2484_3_99 102859 104013 + GT4
CAZyme HRGMv2_2484_3 HRGMv2_2484_3_100 104003 104938 + GT2
pfam HRGMv2_2484_3 HRGMv2_2484_3_101 104935 105741 + ABC2_membrane
TC HRGMv2_2484_3 HRGMv2_2484_3_102 105741 106949 + 3.A.1.103.4
CAZyme HRGMv2_2484_3 HRGMv2_2484_3_103 106977 108011 + GT2
pfam HRGMv2_2484_3 HRGMv2_2484_3_104 108011 109711 + RgpF
CAZyme HRGMv2_2484_3 HRGMv2_2484_3_105 109708 110502 + GT2
CAZyme HRGMv2_2484_3 HRGMv2_2484_3_106 110514 111209 + GT2
Gene ID: HRGMv2_2484_3_99
Type: CAZyme
Location: 102859 - 104013 (+)
Gene ID: HRGMv2_2484_3_100
Type: CAZyme
Location: 104003 - 104938 (+)
Gene ID: HRGMv2_2484_3_101
Type: pfam
Location: 104935 - 105741 (+)
Gene ID: HRGMv2_2484_3_102
Type: TC
Location: 105741 - 106949 (+)
Gene ID: HRGMv2_2484_3_103
Type: CAZyme
Location: 106977 - 108011 (+)
Gene ID: HRGMv2_2484_3_104
Type: pfam
Location: 108011 - 109711 (+)
Gene ID: HRGMv2_2484_3_105
Type: CAZyme
Location: 109708 - 110502 (+)
Gene ID: HRGMv2_2484_3_106
Type: CAZyme
Location: 110514 - 111209 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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