Cluster: HRGMv2_2484_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: beta-mannan
- Genome ID: HRGMv2_2484
- CGC Family ID: CGCFAM_00066
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2484_14 | HRGMv2_2484_14_38 | 31586 | 31900 | + | 4.A.3.2.8 |
| NULL(UNKNOWN) | HRGMv2_2484_14 | HRGMv2_2484_14_39 | 31918 | 32427 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2484_14 | HRGMv2_2484_14_40 | 32461 | 33813 | + | 4.A.3.2.3 |
| pfam | HRGMv2_2484_14 | HRGMv2_2484_14_41 | 34181 | 34999 | + | S6PP | Hydrolase_3 |
| sulfatase | HRGMv2_2484_14 | HRGMv2_2484_14_42 | 35025 | 35678 | + | S1_11 |
| CAZyme | HRGMv2_2484_14 | HRGMv2_2484_14_43 | 35774 | 37276 | + | GH1 |
Gene ID: HRGMv2_2484_14_38
Type: TC
Location: 31586 - 31900 (+)
Type: TC
Location: 31586 - 31900 (+)
Gene ID: HRGMv2_2484_14_39
Type:
Location: 31918 - 32427 (+)
Type:
Location: 31918 - 32427 (+)
Gene ID: HRGMv2_2484_14_40
Type: TC
Location: 32461 - 33813 (+)
Type: TC
Location: 32461 - 33813 (+)
Gene ID: HRGMv2_2484_14_41
Type: pfam
Location: 34181 - 34999 (+)
Type: pfam
Location: 34181 - 34999 (+)
Gene ID: HRGMv2_2484_14_42
Type: sulfatase
Location: 35025 - 35678 (+)
Type: sulfatase
Location: 35025 - 35678 (+)
Gene ID: HRGMv2_2484_14_43
Type: CAZyme
Location: 35774 - 37276 (+)
Type: CAZyme
Location: 35774 - 37276 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus lutetiensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.