Cluster: HRGMv2_2464_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2464
- CGC Family ID: CGCFAM_05260
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2464_7 | HRGMv2_2464_7_44 | 46625 | 48847 | + | 3.A.3.5.30 |
| pfam | HRGMv2_2464_7 | HRGMv2_2464_7_45 | 49145 | 50920 | + | TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N |
| pfam | HRGMv2_2464_7 | HRGMv2_2464_7_46 | 51075 | 51422 | + | Glyoxalase |
| TC | HRGMv2_2464_7 | HRGMv2_2464_7_47 | 51965 | 53539 | + | 3.A.1.201.19 |
| pfam | HRGMv2_2464_7 | HRGMv2_2464_7_48 | 53788 | 54048 | + | MtN3_slv |
| CAZyme | HRGMv2_2464_7 | HRGMv2_2464_7_49 | 54258 | 54815 | + | GH1 |
| CAZyme | HRGMv2_2464_7 | HRGMv2_2464_7_50 | 54812 | 55696 | + | GH1 |
Gene ID: HRGMv2_2464_7_44
Type: TC
Location: 46625 - 48847 (+)
Type: TC
Location: 46625 - 48847 (+)
Gene ID: HRGMv2_2464_7_45
Type: pfam
Location: 49145 - 50920 (+)
Type: pfam
Location: 49145 - 50920 (+)
Gene ID: HRGMv2_2464_7_46
Type: pfam
Location: 51075 - 51422 (+)
Type: pfam
Location: 51075 - 51422 (+)
Gene ID: HRGMv2_2464_7_47
Type: TC
Location: 51965 - 53539 (+)
Type: TC
Location: 51965 - 53539 (+)
Gene ID: HRGMv2_2464_7_48
Type: pfam
Location: 53788 - 54048 (+)
Type: pfam
Location: 53788 - 54048 (+)
Gene ID: HRGMv2_2464_7_49
Type: CAZyme
Location: 54258 - 54815 (+)
Type: CAZyme
Location: 54258 - 54815 (+)
Gene ID: HRGMv2_2464_7_50
Type: CAZyme
Location: 54812 - 55696 (+)
Type: CAZyme
Location: 54812 - 55696 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.