Cluster: HRGMv2_2464_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2464
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2464_4 | HRGMv2_2464_4_72 | 76322 | 78055 | + | 8.A.7.1.1 |
| pfam | HRGMv2_2464_4 | HRGMv2_2464_4_73 | 78292 | 79716 | + | Aldedh |
| CAZyme | HRGMv2_2464_4 | HRGMv2_2464_4_74 | 80102 | 82012 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_2464_4 | HRGMv2_2464_4_75 | 82019 | 83161 | + | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| pfam | HRGMv2_2464_4 | HRGMv2_2464_4_76 | 83112 | 84290 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2464_4 | HRGMv2_2464_4_77 | 84287 | 85717 | + | GT5 |
| CAZyme | HRGMv2_2464_4 | HRGMv2_2464_4_78 | 85930 | 88326 | + | GT35 |
Gene ID: HRGMv2_2464_4_72
Type: TC
Location: 76322 - 78055 (+)
Type: TC
Location: 76322 - 78055 (+)
Gene ID: HRGMv2_2464_4_73
Type: pfam
Location: 78292 - 79716 (+)
Type: pfam
Location: 78292 - 79716 (+)
Gene ID: HRGMv2_2464_4_74
Type: CAZyme
Location: 80102 - 82012 (+)
Type: CAZyme
Location: 80102 - 82012 (+)
Gene ID: HRGMv2_2464_4_75
Type: pfam
Location: 82019 - 83161 (+)
Type: pfam
Location: 82019 - 83161 (+)
Gene ID: HRGMv2_2464_4_76
Type: pfam
Location: 83112 - 84290 (+)
Type: pfam
Location: 83112 - 84290 (+)
Gene ID: HRGMv2_2464_4_77
Type: CAZyme
Location: 84287 - 85717 (+)
Type: CAZyme
Location: 84287 - 85717 (+)
Gene ID: HRGMv2_2464_4_78
Type: CAZyme
Location: 85930 - 88326 (+)
Type: CAZyme
Location: 85930 - 88326 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.