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Cluster: HRGMv2_2464_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2464_37 HRGMv2_2464_37_3 1844 2836 + GT8
CAZyme HRGMv2_2464_37 HRGMv2_2464_37_4 2873 3589 + GT2
pfam HRGMv2_2464_37 HRGMv2_2464_37_5 3589 3948 + DUF2304
CAZyme HRGMv2_2464_37 HRGMv2_2464_37_6 3938 4717 + GT2
CAZyme HRGMv2_2464_37 HRGMv2_2464_37_7 4742 7723 + GT2
pfam HRGMv2_2464_37 HRGMv2_2464_37_8 7710 9017 + DUF2142
CAZyme HRGMv2_2464_37 HRGMv2_2464_37_9 9021 10268 + GT4
CAZyme HRGMv2_2464_37 HRGMv2_2464_37_10 10382 11530 + GT4
CAZyme HRGMv2_2464_37 HRGMv2_2464_37_11 11527 12462 + GT2
pfam HRGMv2_2464_37 HRGMv2_2464_37_12 12468 13274 + ABC2_membrane
TC HRGMv2_2464_37 HRGMv2_2464_37_13 13274 14479 + 3.A.1.103.5
Gene ID: HRGMv2_2464_37_3
Type: CAZyme
Location: 1844 - 2836 (+)
Gene ID: HRGMv2_2464_37_4
Type: CAZyme
Location: 2873 - 3589 (+)
Gene ID: HRGMv2_2464_37_5
Type: pfam
Location: 3589 - 3948 (+)
Gene ID: HRGMv2_2464_37_6
Type: CAZyme
Location: 3938 - 4717 (+)
Gene ID: HRGMv2_2464_37_7
Type: CAZyme
Location: 4742 - 7723 (+)
Gene ID: HRGMv2_2464_37_8
Type: pfam
Location: 7710 - 9017 (+)
Gene ID: HRGMv2_2464_37_9
Type: CAZyme
Location: 9021 - 10268 (+)
Gene ID: HRGMv2_2464_37_10
Type: CAZyme
Location: 10382 - 11530 (+)
Gene ID: HRGMv2_2464_37_11
Type: CAZyme
Location: 11527 - 12462 (+)
Gene ID: HRGMv2_2464_37_12
Type: pfam
Location: 12468 - 13274 (+)
Gene ID: HRGMv2_2464_37_13
Type: TC
Location: 13274 - 14479 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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