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Cluster: HRGMv2_2464_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2464_24 HRGMv2_2464_24_28 26829 27479 - 9.B.28.1.4
pfam HRGMv2_2464_24 HRGMv2_2464_24_29 27501 27953 - DUF386
TC HRGMv2_2464_24 HRGMv2_2464_24_30 27958 28788 - 3.A.1.1.34
TC HRGMv2_2464_24 HRGMv2_2464_24_31 28805 29692 - 3.A.1.1.20
STP HRGMv2_2464_24 HRGMv2_2464_24_32 29788 31107 - SBP_bac_1
TC HRGMv2_2464_24 HRGMv2_2464_24_33 31365 32501 - 3.A.1.1.27
pfam HRGMv2_2464_24 HRGMv2_2464_24_34 32515 33213 - NanE
CAZyme HRGMv2_2464_24 HRGMv2_2464_24_35 33591 34592 - CE7
Gene ID: HRGMv2_2464_24_28
Type: TC
Location: 26829 - 27479 (-)
Gene ID: HRGMv2_2464_24_29
Type: pfam
Location: 27501 - 27953 (-)
Gene ID: HRGMv2_2464_24_30
Type: TC
Location: 27958 - 28788 (-)
Gene ID: HRGMv2_2464_24_31
Type: TC
Location: 28805 - 29692 (-)
Gene ID: HRGMv2_2464_24_32
Type: STP
Location: 29788 - 31107 (-)
Gene ID: HRGMv2_2464_24_33
Type: TC
Location: 31365 - 32501 (-)
Gene ID: HRGMv2_2464_24_34
Type: pfam
Location: 32515 - 33213 (-)
Gene ID: HRGMv2_2464_24_35
Type: CAZyme
Location: 33591 - 34592 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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