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Cluster: HRGMv2_2464_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2464_24 HRGMv2_2464_24_11 9262 10539 - 2.A.66.1.34
STP HRGMv2_2464_24 HRGMv2_2464_24_12 10648 12132 - PALP
CAZyme HRGMv2_2464_24 HRGMv2_2464_24_13 12245 13342 - CBM50
TC HRGMv2_2464_24 HRGMv2_2464_24_14 13776 14399 - 3.A.2.2.2
TC HRGMv2_2464_24 HRGMv2_2464_24_15 14396 15790 - 3.A.2.2.2
TC HRGMv2_2464_24 HRGMv2_2464_24_16 15777 17567 - 3.A.2.2.2
pfam HRGMv2_2464_24 HRGMv2_2464_24_17 17740 18435 - Acetyltransf_1 | Acetyltransf_3
TC HRGMv2_2464_24 HRGMv2_2464_24_18 18443 18763 - 3.A.2.2.2
TC HRGMv2_2464_24 HRGMv2_2464_24_19 18750 19763 - 3.A.2.2.2
NULL(UNKNOWN) HRGMv2_2464_24 HRGMv2_2464_24_20 19774 20364 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2464_24 HRGMv2_2464_24_21 20375 20854 - 3.A.2.2.2
TC HRGMv2_2464_24 HRGMv2_2464_24_22 20987 22942 - 3.A.2.2.2
Gene ID: HRGMv2_2464_24_11
Type: TC
Location: 9262 - 10539 (-)
Gene ID: HRGMv2_2464_24_12
Type: STP
Location: 10648 - 12132 (-)
Gene ID: HRGMv2_2464_24_13
Type: CAZyme
Location: 12245 - 13342 (-)
Gene ID: HRGMv2_2464_24_14
Type: TC
Location: 13776 - 14399 (-)
Gene ID: HRGMv2_2464_24_15
Type: TC
Location: 14396 - 15790 (-)
Gene ID: HRGMv2_2464_24_16
Type: TC
Location: 15777 - 17567 (-)
Gene ID: HRGMv2_2464_24_17
Type: pfam
Location: 17740 - 18435 (-)
Gene ID: HRGMv2_2464_24_18
Type: TC
Location: 18443 - 18763 (-)
Gene ID: HRGMv2_2464_24_19
Type: TC
Location: 18750 - 19763 (-)
Gene ID: HRGMv2_2464_24_20
Type:
Location: 19774 - 20364 (-)
Gene ID: HRGMv2_2464_24_21
Type: TC
Location: 20375 - 20854 (-)
Gene ID: HRGMv2_2464_24_22
Type: TC
Location: 20987 - 22942 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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