Cluster: HRGMv2_2464_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2464
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2464_21 | HRGMv2_2464_21_5 | 5737 | 6663 | + | GT2 |
| TC | HRGMv2_2464_21 | HRGMv2_2464_21_6 | 6660 | 8144 | + | 3.A.7.19.1 |
| pfam | HRGMv2_2464_21 | HRGMv2_2464_21_7 | 8405 | 9259 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| pfam | HRGMv2_2464_21 | HRGMv2_2464_21_8 | 9538 | 10296 | + | TIM |
| CAZyme | HRGMv2_2464_21 | HRGMv2_2464_21_9 | 10361 | 14239 | + | GH25 |
Gene ID: HRGMv2_2464_21_5
Type: CAZyme
Location: 5737 - 6663 (+)
Type: CAZyme
Location: 5737 - 6663 (+)
Gene ID: HRGMv2_2464_21_6
Type: TC
Location: 6660 - 8144 (+)
Type: TC
Location: 6660 - 8144 (+)
Gene ID: HRGMv2_2464_21_7
Type: pfam
Location: 8405 - 9259 (+)
Type: pfam
Location: 8405 - 9259 (+)
Gene ID: HRGMv2_2464_21_8
Type: pfam
Location: 9538 - 10296 (+)
Type: pfam
Location: 9538 - 10296 (+)
Gene ID: HRGMv2_2464_21_9
Type: CAZyme
Location: 10361 - 14239 (+)
Type: CAZyme
Location: 10361 - 14239 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.