dbCAN Logo

Cluster: HRGMv2_2464_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2464_15 HRGMv2_2464_15_26 28352 28669 + 4.A.3.2.4
TC HRGMv2_2464_15 HRGMv2_2464_15_27 28708 28995 + 4.A.3.2.2
TC HRGMv2_2464_15 HRGMv2_2464_15_28 29007 30362 + 4.A.3.2.4
CAZyme HRGMv2_2464_15 HRGMv2_2464_15_29 30363 32141 + GH35
TC HRGMv2_2464_15 HRGMv2_2464_15_30 32151 33080 + 8.A.5.1.7
pfam HRGMv2_2464_15 HRGMv2_2464_15_31 33199 34614 + Gram_pos_anchor
pfam HRGMv2_2464_15 HRGMv2_2464_15_32 34694 35635 - Zn_ribbon_Top1 | NERD
CAZyme HRGMv2_2464_15 HRGMv2_2464_15_33 35847 36716 + GT2
Gene ID: HRGMv2_2464_15_26
Type: TC
Location: 28352 - 28669 (+)
Gene ID: HRGMv2_2464_15_27
Type: TC
Location: 28708 - 28995 (+)
Gene ID: HRGMv2_2464_15_28
Type: TC
Location: 29007 - 30362 (+)
Gene ID: HRGMv2_2464_15_29
Type: CAZyme
Location: 30363 - 32141 (+)
Gene ID: HRGMv2_2464_15_30
Type: TC
Location: 32151 - 33080 (+)
Gene ID: HRGMv2_2464_15_31
Type: pfam
Location: 33199 - 34614 (+)
Gene ID: HRGMv2_2464_15_32
Type: pfam
Location: 34694 - 35635 (-)
Gene ID: HRGMv2_2464_15_33
Type: CAZyme
Location: 35847 - 36716 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List