Cluster: HRGMv2_2464_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2464
- CGC Family ID: CGCFAM_00010
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2464_11 | HRGMv2_2464_11_59 | 53913 | 56174 | - | GT35 |
| CAZyme | HRGMv2_2464_11 | HRGMv2_2464_11_60 | 56207 | 57718 | - | GH77 |
| TF | HRGMv2_2464_11 | HRGMv2_2464_11_61 | 58154 | 59137 | + | LacI |
| CAZyme | HRGMv2_2464_11 | HRGMv2_2464_11_62 | 59255 | 61333 | + | CBM68 | GH13_14 |
| TC | HRGMv2_2464_11 | HRGMv2_2464_11_63 | 61369 | 62304 | - | 2.A.115.1.1 |
Gene ID: HRGMv2_2464_11_59
Type: CAZyme
Location: 53913 - 56174 (-)
Type: CAZyme
Location: 53913 - 56174 (-)
Gene ID: HRGMv2_2464_11_60
Type: CAZyme
Location: 56207 - 57718 (-)
Type: CAZyme
Location: 56207 - 57718 (-)
Gene ID: HRGMv2_2464_11_61
Type: TF
Location: 58154 - 59137 (+)
Type: TF
Location: 58154 - 59137 (+)
Gene ID: HRGMv2_2464_11_62
Type: CAZyme
Location: 59255 - 61333 (+)
Type: CAZyme
Location: 59255 - 61333 (+)
Gene ID: HRGMv2_2464_11_63
Type: TC
Location: 61369 - 62304 (-)
Type: TC
Location: 61369 - 62304 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.