Cluster: HRGMv2_2464_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2464
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2464_11 | HRGMv2_2464_11_13 | 12195 | 13154 | - | GT2 |
| CAZyme | HRGMv2_2464_11 | HRGMv2_2464_11_14 | 13246 | 14079 | - | GT2 |
| pfam | HRGMv2_2464_11 | HRGMv2_2464_11_15 | 14090 | 14950 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| TC | HRGMv2_2464_11 | HRGMv2_2464_11_16 | 14957 | 15562 | - | 9.B.18.1.3 |
| TC | HRGMv2_2464_11 | HRGMv2_2464_11_17 | 15578 | 17380 | - | 9.B.18.2.1 |
| TC | HRGMv2_2464_11 | HRGMv2_2464_11_18 | 17419 | 18117 | - | 8.A.3.2.2 |
| TC | HRGMv2_2464_11 | HRGMv2_2464_11_19 | 18128 | 18823 | - | 8.A.3.2.3 |
Gene ID: HRGMv2_2464_11_13
Type: CAZyme
Location: 12195 - 13154 (-)
Type: CAZyme
Location: 12195 - 13154 (-)
Gene ID: HRGMv2_2464_11_14
Type: CAZyme
Location: 13246 - 14079 (-)
Type: CAZyme
Location: 13246 - 14079 (-)
Gene ID: HRGMv2_2464_11_15
Type: pfam
Location: 14090 - 14950 (-)
Type: pfam
Location: 14090 - 14950 (-)
Gene ID: HRGMv2_2464_11_16
Type: TC
Location: 14957 - 15562 (-)
Type: TC
Location: 14957 - 15562 (-)
Gene ID: HRGMv2_2464_11_17
Type: TC
Location: 15578 - 17380 (-)
Type: TC
Location: 15578 - 17380 (-)
Gene ID: HRGMv2_2464_11_18
Type: TC
Location: 17419 - 18117 (-)
Type: TC
Location: 17419 - 18117 (-)
Gene ID: HRGMv2_2464_11_19
Type: TC
Location: 18128 - 18823 (-)
Type: TC
Location: 18128 - 18823 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.