Cluster: HRGMv2_2455_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2455
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2455_15 | HRGMv2_2455_15_22 | 26931 | 27764 | - | 3.A.1.1.49 |
| TC | HRGMv2_2455_15 | HRGMv2_2455_15_23 | 27769 | 28686 | - | 3.A.1.1.7 |
| TC | HRGMv2_2455_15 | HRGMv2_2455_15_24 | 28765 | 30105 | - | 3.A.1.1.19 |
| TF | HRGMv2_2455_15 | HRGMv2_2455_15_25 | 30406 | 31179 | + | HTH_DeoR |
| NULL(UNKNOWN) | HRGMv2_2455_15 | HRGMv2_2455_15_26 | 31800 | 32462 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2455_15 | HRGMv2_2455_15_27 | 32629 | 34542 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_2455_15_22
Type: TC
Location: 26931 - 27764 (-)
Type: TC
Location: 26931 - 27764 (-)
Gene ID: HRGMv2_2455_15_23
Type: TC
Location: 27769 - 28686 (-)
Type: TC
Location: 27769 - 28686 (-)
Gene ID: HRGMv2_2455_15_24
Type: TC
Location: 28765 - 30105 (-)
Type: TC
Location: 28765 - 30105 (-)
Gene ID: HRGMv2_2455_15_25
Type: TF
Location: 30406 - 31179 (+)
Type: TF
Location: 30406 - 31179 (+)
Gene ID: HRGMv2_2455_15_26
Type:
Location: 31800 - 32462 (-)
Type:
Location: 31800 - 32462 (-)
Gene ID: HRGMv2_2455_15_27
Type: CAZyme
Location: 32629 - 34542 (-)
Type: CAZyme
Location: 32629 - 34542 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA11957
Species
UBA11957 sp019420465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.