Cluster: HRGMv2_2455_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2455
- CGC Family ID: CGCFAM_01112
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2455_15 | HRGMv2_2455_15_6 | 6558 | 7400 | - | 3.A.1.1.46 |
| TC | HRGMv2_2455_15 | HRGMv2_2455_15_7 | 7400 | 8317 | - | 3.A.1.1.41 |
| STP | HRGMv2_2455_15 | HRGMv2_2455_15_8 | 8461 | 9882 | - | SBP_bac_1 |
| pfam | HRGMv2_2455_15 | HRGMv2_2455_15_9 | 9947 | 11128 | - | Cys_Met_Meta_PP | Beta_elim_lyase |
| CAZyme | HRGMv2_2455_15 | HRGMv2_2455_15_10 | 11497 | 13545 | + | GH151 |
Gene ID: HRGMv2_2455_15_6
Type: TC
Location: 6558 - 7400 (-)
Type: TC
Location: 6558 - 7400 (-)
Gene ID: HRGMv2_2455_15_7
Type: TC
Location: 7400 - 8317 (-)
Type: TC
Location: 7400 - 8317 (-)
Gene ID: HRGMv2_2455_15_8
Type: STP
Location: 8461 - 9882 (-)
Type: STP
Location: 8461 - 9882 (-)
Gene ID: HRGMv2_2455_15_9
Type: pfam
Location: 9947 - 11128 (-)
Type: pfam
Location: 9947 - 11128 (-)
Gene ID: HRGMv2_2455_15_10
Type: CAZyme
Location: 11497 - 13545 (+)
Type: CAZyme
Location: 11497 - 13545 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA11957
Species
UBA11957 sp019420465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.