Cluster: HRGMv2_2455_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2455
- CGC Family ID: CGCFAM_01118
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2455_14 | HRGMv2_2455_14_3 | 3242 | 5173 | - | 3.A.1.135.5 |
| TC | HRGMv2_2455_14 | HRGMv2_2455_14_4 | 5173 | 6927 | - | 3.A.1.135.5 |
| TF | HRGMv2_2455_14 | HRGMv2_2455_14_5 | 6933 | 7571 | - | MarR |
| pfam | HRGMv2_2455_14 | HRGMv2_2455_14_6 | 7893 | 8618 | - | SpoU_methylase |
| CAZyme | HRGMv2_2455_14 | HRGMv2_2455_14_7 | 8620 | 10317 | - | GH25 |
Gene ID: HRGMv2_2455_14_3
Type: TC
Location: 3242 - 5173 (-)
Type: TC
Location: 3242 - 5173 (-)
Gene ID: HRGMv2_2455_14_4
Type: TC
Location: 5173 - 6927 (-)
Type: TC
Location: 5173 - 6927 (-)
Gene ID: HRGMv2_2455_14_5
Type: TF
Location: 6933 - 7571 (-)
Type: TF
Location: 6933 - 7571 (-)
Gene ID: HRGMv2_2455_14_6
Type: pfam
Location: 7893 - 8618 (-)
Type: pfam
Location: 7893 - 8618 (-)
Gene ID: HRGMv2_2455_14_7
Type: CAZyme
Location: 8620 - 10317 (-)
Type: CAZyme
Location: 8620 - 10317 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA11957
Species
UBA11957 sp019420465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.