Cluster: HRGMv2_2455_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2455
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2455_13 | HRGMv2_2455_13_41 | 41264 | 43156 | + | GH13_11 |
| pfam | HRGMv2_2455_13 | HRGMv2_2455_13_42 | 43153 | 43710 | + | DUF5662 |
| TC | HRGMv2_2455_13 | HRGMv2_2455_13_43 | 43774 | 45561 | + | 3.A.1.120.6 |
| TF | HRGMv2_2455_13 | HRGMv2_2455_13_44 | 45774 | 46319 | + | HTH_3 |
| pfam | HRGMv2_2455_13 | HRGMv2_2455_13_45 | 46425 | 48191 | - | Acetyltransf_1 | LPG_synthase_C | Acetyltransf_9 |
| TC | HRGMv2_2455_13 | HRGMv2_2455_13_46 | 48499 | 50037 | + | 2.A.25.1.5 |
Gene ID: HRGMv2_2455_13_41
Type: CAZyme
Location: 41264 - 43156 (+)
Type: CAZyme
Location: 41264 - 43156 (+)
Gene ID: HRGMv2_2455_13_42
Type: pfam
Location: 43153 - 43710 (+)
Type: pfam
Location: 43153 - 43710 (+)
Gene ID: HRGMv2_2455_13_43
Type: TC
Location: 43774 - 45561 (+)
Type: TC
Location: 43774 - 45561 (+)
Gene ID: HRGMv2_2455_13_44
Type: TF
Location: 45774 - 46319 (+)
Type: TF
Location: 45774 - 46319 (+)
Gene ID: HRGMv2_2455_13_45
Type: pfam
Location: 46425 - 48191 (-)
Type: pfam
Location: 46425 - 48191 (-)
Gene ID: HRGMv2_2455_13_46
Type: TC
Location: 48499 - 50037 (+)
Type: TC
Location: 48499 - 50037 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA11957
Species
UBA11957 sp019420465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.