Cluster: HRGMv2_2455_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2455
- CGC Family ID: CGCFAM_00088
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2455_47 | HRGMv2_2455_47_2 | 1749 | 3464 | + | 8.A.59.2.1 |
| TC | HRGMv2_2455_47 | HRGMv2_2455_47_3 | 3448 | 5157 | + | 3.A.1.1.9 |
| TC | HRGMv2_2455_47 | HRGMv2_2455_47_4 | 5324 | 6745 | + | 3.A.1.1.45 |
| TC | HRGMv2_2455_47 | HRGMv2_2455_47_5 | 6887 | 7729 | + | 3.A.1.1.45 |
| TC | HRGMv2_2455_47 | HRGMv2_2455_47_6 | 7729 | 8571 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_2455_47 | HRGMv2_2455_47_7 | 8771 | 10249 | + | GH77 |
Gene ID: HRGMv2_2455_47_2
Type: TC
Location: 1749 - 3464 (+)
Type: TC
Location: 1749 - 3464 (+)
Gene ID: HRGMv2_2455_47_3
Type: TC
Location: 3448 - 5157 (+)
Type: TC
Location: 3448 - 5157 (+)
Gene ID: HRGMv2_2455_47_4
Type: TC
Location: 5324 - 6745 (+)
Type: TC
Location: 5324 - 6745 (+)
Gene ID: HRGMv2_2455_47_5
Type: TC
Location: 6887 - 7729 (+)
Type: TC
Location: 6887 - 7729 (+)
Gene ID: HRGMv2_2455_47_6
Type: TC
Location: 7729 - 8571 (+)
Type: TC
Location: 7729 - 8571 (+)
Gene ID: HRGMv2_2455_47_7
Type: CAZyme
Location: 8771 - 10249 (+)
Type: CAZyme
Location: 8771 - 10249 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA11957
Species
UBA11957 sp019420465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2455_47_5 | vegetarian > vegan | 1.71527 | 0.00181 |