Cluster: HRGMv2_2455_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2455
- CGC Family ID: CGCFAM_00105
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2455_36 | HRGMv2_2455_36_3 | 2390 | 3121 | - | 3.A.1.103.4 |
| pfam | HRGMv2_2455_36 | HRGMv2_2455_36_4 | 3135 | 3917 | - | ABC2_membrane |
| CAZyme | HRGMv2_2455_36 | HRGMv2_2455_36_5 | 4141 | 6795 | + | GT2 |
| pfam | HRGMv2_2455_36 | HRGMv2_2455_36_6 | 6867 | 8084 | - | Wzy_C |
| CAZyme | HRGMv2_2455_36 | HRGMv2_2455_36_7 | 8191 | 9165 | - | GT2 |
Gene ID: HRGMv2_2455_36_3
Type: TC
Location: 2390 - 3121 (-)
Type: TC
Location: 2390 - 3121 (-)
Gene ID: HRGMv2_2455_36_4
Type: pfam
Location: 3135 - 3917 (-)
Type: pfam
Location: 3135 - 3917 (-)
Gene ID: HRGMv2_2455_36_5
Type: CAZyme
Location: 4141 - 6795 (+)
Type: CAZyme
Location: 4141 - 6795 (+)
Gene ID: HRGMv2_2455_36_6
Type: pfam
Location: 6867 - 8084 (-)
Type: pfam
Location: 6867 - 8084 (-)
Gene ID: HRGMv2_2455_36_7
Type: CAZyme
Location: 8191 - 9165 (-)
Type: CAZyme
Location: 8191 - 9165 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA11957
Species
UBA11957 sp019420465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.