Cluster: HRGMv2_2455_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2455
- CGC Family ID: CGCFAM_10092
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2455_29 | HRGMv2_2455_29_18 | 18620 | 19807 | + | 2.A.27.1.1 |
| NULL(UNKNOWN) | HRGMv2_2455_29 | HRGMv2_2455_29_19 | 19824 | 20030 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2455_29 | HRGMv2_2455_29_20 | 20189 | 22315 | - | GH13_11 |
| TC | HRGMv2_2455_29 | HRGMv2_2455_29_21 | 22333 | 23787 | - | 2.A.38.1.1 |
| TC | HRGMv2_2455_29 | HRGMv2_2455_29_22 | 23799 | 25154 | - | 3.A.3.1.8 |
Gene ID: HRGMv2_2455_29_18
Type: TC
Location: 18620 - 19807 (+)
Type: TC
Location: 18620 - 19807 (+)
Gene ID: HRGMv2_2455_29_19
Type:
Location: 19824 - 20030 (+)
Type:
Location: 19824 - 20030 (+)
Gene ID: HRGMv2_2455_29_20
Type: CAZyme
Location: 20189 - 22315 (-)
Type: CAZyme
Location: 20189 - 22315 (-)
Gene ID: HRGMv2_2455_29_21
Type: TC
Location: 22333 - 23787 (-)
Type: TC
Location: 22333 - 23787 (-)
Gene ID: HRGMv2_2455_29_22
Type: TC
Location: 23799 - 25154 (-)
Type: TC
Location: 23799 - 25154 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA11957
Species
UBA11957 sp019420465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.