Cluster: HRGMv2_2454_CGC10
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 10
- Substrate:
- Genome ID: HRGMv2_2454
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2454_26 | HRGMv2_2454_26_2 | 1047 | 2621 | - | GH43_10 |
| CAZyme | HRGMv2_2454_26 | HRGMv2_2454_26_3 | 2608 | 4443 | - | GH43_27 |
| TF | HRGMv2_2454_26 | HRGMv2_2454_26_4 | 4590 | 5387 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2454_26 | HRGMv2_2454_26_5 | 5502 | 6635 | + | GH27 |
| CAZyme | HRGMv2_2454_26 | HRGMv2_2454_26_6 | 6845 | 8386 | - | CBM91 | GH43_12 |
| CAZyme | HRGMv2_2454_26 | HRGMv2_2454_26_7 | 8443 | 10668 | - | GH95 |
| CAZyme | HRGMv2_2454_26 | HRGMv2_2454_26_8 | 10661 | 12277 | - | CBM91 | GH43_10 |
| CAZyme | HRGMv2_2454_26 | HRGMv2_2454_26_9 | 12337 | 14238 | - | GH10 |
| CAZyme | HRGMv2_2454_26 | HRGMv2_2454_26_10 | 14280 | 15686 | - | GH43_35 |
| CAZyme | HRGMv2_2454_26 | HRGMv2_2454_26_11 | 15715 | 18060 | - | CE1 | CE1 |
| CAZyme | HRGMv2_2454_26 | HRGMv2_2454_26_12 | 18108 | 19757 | - | CBM6 | GH43_16 |
| TC | HRGMv2_2454_26 | HRGMv2_2454_26_13 | 19761 | 20648 | - | 3.A.1.125.1 |
| TC | HRGMv2_2454_26 | HRGMv2_2454_26_14 | 20633 | 21313 | - | 3.A.1.122.6 |
Gene ID: HRGMv2_2454_26_2
Type: CAZyme
Location: 1047 - 2621 (-)
Type: CAZyme
Location: 1047 - 2621 (-)
Gene ID: HRGMv2_2454_26_3
Type: CAZyme
Location: 2608 - 4443 (-)
Type: CAZyme
Location: 2608 - 4443 (-)
Gene ID: HRGMv2_2454_26_4
Type: TF
Location: 4590 - 5387 (-)
Type: TF
Location: 4590 - 5387 (-)
Gene ID: HRGMv2_2454_26_5
Type: CAZyme
Location: 5502 - 6635 (+)
Type: CAZyme
Location: 5502 - 6635 (+)
Gene ID: HRGMv2_2454_26_6
Type: CAZyme
Location: 6845 - 8386 (-)
Type: CAZyme
Location: 6845 - 8386 (-)
Gene ID: HRGMv2_2454_26_7
Type: CAZyme
Location: 8443 - 10668 (-)
Type: CAZyme
Location: 8443 - 10668 (-)
Gene ID: HRGMv2_2454_26_8
Type: CAZyme
Location: 10661 - 12277 (-)
Type: CAZyme
Location: 10661 - 12277 (-)
Gene ID: HRGMv2_2454_26_9
Type: CAZyme
Location: 12337 - 14238 (-)
Type: CAZyme
Location: 12337 - 14238 (-)
Gene ID: HRGMv2_2454_26_10
Type: CAZyme
Location: 14280 - 15686 (-)
Type: CAZyme
Location: 14280 - 15686 (-)
Gene ID: HRGMv2_2454_26_11
Type: CAZyme
Location: 15715 - 18060 (-)
Type: CAZyme
Location: 15715 - 18060 (-)
Gene ID: HRGMv2_2454_26_12
Type: CAZyme
Location: 18108 - 19757 (-)
Type: CAZyme
Location: 18108 - 19757 (-)
Gene ID: HRGMv2_2454_26_13
Type: TC
Location: 19761 - 20648 (-)
Type: TC
Location: 19761 - 20648 (-)
Gene ID: HRGMv2_2454_26_14
Type: TC
Location: 20633 - 21313 (-)
Type: TC
Location: 20633 - 21313 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Bariatricus
Species
Bariatricus sp905216215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.