Cluster: HRGMv2_2453_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2453
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2453_3 | HRGMv2_2453_3_97 | 112818 | 113672 | + | 4.A.6.1.19 |
| TC | HRGMv2_2453_3 | HRGMv2_2453_3_98 | 113674 | 114510 | + | 4.A.6.1.15 |
| NULL(UNKNOWN) | HRGMv2_2453_3 | HRGMv2_2453_3_99 | 114526 | 114816 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2453_3 | HRGMv2_2453_3_100 | 114893 | 118717 | + | CBM66 | CBM66 | GH32 |
Gene ID: HRGMv2_2453_3_97
Type: TC
Location: 112818 - 113672 (+)
Type: TC
Location: 112818 - 113672 (+)
Gene ID: HRGMv2_2453_3_98
Type: TC
Location: 113674 - 114510 (+)
Type: TC
Location: 113674 - 114510 (+)
Gene ID: HRGMv2_2453_3_99
Type:
Location: 114526 - 114816 (+)
Type:
Location: 114526 - 114816 (+)
Gene ID: HRGMv2_2453_3_100
Type: CAZyme
Location: 114893 - 118717 (+)
Type: CAZyme
Location: 114893 - 118717 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2453_3_98 | vegan > omnivore | 1.80008 | 0.00224 |