Cluster: HRGMv2_2453_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2453
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2453_2 | HRGMv2_2453_2_177 | 186196 | 187626 | + | GH77 |
| TC | HRGMv2_2453_2 | HRGMv2_2453_2_178 | 187936 | 188943 | + | 3.A.1.34.1 |
| TC | HRGMv2_2453_2 | HRGMv2_2453_2_179 | 189041 | 189934 | + | 3.A.1.34.1 |
| TC | HRGMv2_2453_2 | HRGMv2_2453_2_180 | 189950 | 190744 | + | 3.A.1.34.1 |
Gene ID: HRGMv2_2453_2_177
Type: CAZyme
Location: 186196 - 187626 (+)
Type: CAZyme
Location: 186196 - 187626 (+)
Gene ID: HRGMv2_2453_2_178
Type: TC
Location: 187936 - 188943 (+)
Type: TC
Location: 187936 - 188943 (+)
Gene ID: HRGMv2_2453_2_179
Type: TC
Location: 189041 - 189934 (+)
Type: TC
Location: 189041 - 189934 (+)
Gene ID: HRGMv2_2453_2_180
Type: TC
Location: 189950 - 190744 (+)
Type: TC
Location: 189950 - 190744 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2453_2_179 | vegan > omnivore | 1.03525 | 0.00224 |