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Cluster: HRGMv2_2453_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2453_20 HRGMv2_2453_20_23 21766 22818 - 4.A.2.1.4
TF HRGMv2_2453_20 HRGMv2_2453_20_24 23085 24125 - LacI
TC HRGMv2_2453_20 HRGMv2_2453_20_25 24276 24929 - 9.A.32.1.1
TF HRGMv2_2453_20 HRGMv2_2453_20_26 24913 25197 - HTH_5
pfam HRGMv2_2453_20 HRGMv2_2453_20_27 25389 26303 + S6PP | Hydrolase_3
CAZyme HRGMv2_2453_20 HRGMv2_2453_20_28 26312 28537 - GH36
pfam HRGMv2_2453_20 HRGMv2_2453_20_29 28539 28991 - AHSA1 | DUF3284
TC HRGMv2_2453_20 HRGMv2_2453_20_30 29010 30293 - 4.A.3.2.8
Gene ID: HRGMv2_2453_20_23
Type: TC
Location: 21766 - 22818 (-)
Gene ID: HRGMv2_2453_20_24
Type: TF
Location: 23085 - 24125 (-)
Gene ID: HRGMv2_2453_20_25
Type: TC
Location: 24276 - 24929 (-)
Gene ID: HRGMv2_2453_20_26
Type: TF
Location: 24913 - 25197 (-)
Gene ID: HRGMv2_2453_20_27
Type: pfam
Location: 25389 - 26303 (+)
Gene ID: HRGMv2_2453_20_28
Type: CAZyme
Location: 26312 - 28537 (-)
Gene ID: HRGMv2_2453_20_29
Type: pfam
Location: 28539 - 28991 (-)
Gene ID: HRGMv2_2453_20_30
Type: TC
Location: 29010 - 30293 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Anaerostipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2453_20_25 vegan > omnivore 1.57554 0.00224
HRGMv2_2453_20_26 vegan > omnivore 1.52201 0.00224
HRGMv2_2453_20_27 vegan > omnivore 1.41102 0.00224

🧭 Explore Read Mapping of CGC

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