Cluster: HRGMv2_2453_CGC34
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2453
- CGC Family ID: CGCFAM_05754
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2453_18 | HRGMv2_2453_18_12 | 10194 | 11522 | + | 2.A.66.1.25 |
| TC | HRGMv2_2453_18 | HRGMv2_2453_18_13 | 11897 | 13210 | - | 2.A.66.1.37 |
| CAZyme | HRGMv2_2453_18 | HRGMv2_2453_18_14 | 13411 | 15291 | - | GT5 |
Gene ID: HRGMv2_2453_18_12
Type: TC
Location: 10194 - 11522 (+)
Type: TC
Location: 10194 - 11522 (+)
Gene ID: HRGMv2_2453_18_13
Type: TC
Location: 11897 - 13210 (-)
Type: TC
Location: 11897 - 13210 (-)
Gene ID: HRGMv2_2453_18_14
Type: CAZyme
Location: 13411 - 15291 (-)
Type: CAZyme
Location: 13411 - 15291 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2453_18_14 | vegan > omnivore | 1.34831 | 0.00224 |