Cluster: HRGMv2_2453_CGC31
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2453
- CGC Family ID: CGCFAM_00131
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2453_13 | HRGMv2_2453_13_64 | 64982 | 66547 | + | 4.A.1.1.8 |
| CAZyme | HRGMv2_2453_13 | HRGMv2_2453_13_65 | 66584 | 67918 | + | GH4 |
| TC | HRGMv2_2453_13 | HRGMv2_2453_13_66 | 67958 | 68443 | + | 4.A.1.1.1 |
Gene ID: HRGMv2_2453_13_64
Type: TC
Location: 64982 - 66547 (+)
Type: TC
Location: 64982 - 66547 (+)
Gene ID: HRGMv2_2453_13_65
Type: CAZyme
Location: 66584 - 67918 (+)
Type: CAZyme
Location: 66584 - 67918 (+)
Gene ID: HRGMv2_2453_13_66
Type: TC
Location: 67958 - 68443 (+)
Type: TC
Location: 67958 - 68443 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2453_13_64 | vegan > omnivore | 1.74742 | 0.00224 |